The detailed information of tRNA gene sequence


Sequence ID>ENV08001860
Genome IDABOG01041541
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 96
End posion on genome 22
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnacgattag
tRNA gene sequence 
GGGTTGGTGGTCTAGTCTGGTTATGACACCTCCTTGACATGGAGGAGACCGGCAGTTCAA
ATCTGCCCCAACCCAtcc
Downstream region at tRNA end position 
tatatagatt
Secondary structure (Cloverleaf model)
>ENV08001860	Val	GAC
                   g      Atcc tatatagatt
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G T C     A
    C T G A        G      | | | | |     A
  T         T C T G       G G C A G     C
  G           | | |                 T T
  G         T G A C
    T T A          A     AGACC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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