The detailed information of tRNA gene sequence


Sequence ID>WENV170005088
Genome IDAKVG01000030
Search identical group
Phylum/Class[AKVG] hypersaline lake metagenome; aqueous lake water sample, post-0.1 um filtrate containing the viral fraction
Species
Start position on genome 5964
End posion on genome 6036
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gggggcatac
tRNA gene sequence
GGGGAGGTGGTCAAGCGGACTAAGATTGCTACCTTGGGCGTAGCAGACTCAGGTTCAAAT
CCTGACTTCCCCAtac
Downstream region at tRNA end position
tgagggcttt
Secondary structure (Cloverleaf model)
>WENV170005088	Pro	TGG
                   c      Atac tgagggcttt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     A G T C C     A
      C G A        G      | | | | |     A
    G       A C T G       T C A G G     C
    G         | | +                 T T
    A       A G A T
      C T A        T     AGAC
                    G - C
                    C - G
                    T - A
                    A - T
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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