The detailed information of tRNA gene sequence


Sequence ID>WENV170005092
Genome IDAKVG01000030
Search identical group
Phylum/Class[AKVG] hypersaline lake metagenome; aqueous lake water sample, post-0.1 um filtrate containing the viral fraction
Species
Start position on genome 7224
End posion on genome 7298
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagttggtac
tRNA gene sequence 
GGCGAGGTAGTTCAGTCAGGAGTGAACACCGGGTTCATATCCCGGATGTCCTTGGTTCAA
ATCCAAGTCTCGTCAata
Downstream region at tRNA end position 
cacttaaaaa
Secondary structure (Cloverleaf model)
>WENV170005092	Met	CAT
                   c      Aata cacttaaaaa
                     G - C
                     G + T
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G A A C C     A
    C T G A        A      | | | | |     A
  A         C T T G       C T T G G     C
  G         | | | |                 T T
  G         G A A C
    A G T          A     ATGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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