The detailed information of tRNA gene sequence


Sequence ID>WENV170005094
Genome IDAKVG01000030
Search identical group
Phylum/Class[AKVG] hypersaline lake metagenome; aqueous lake water sample, post-0.1 um filtrate containing the viral fraction
Species
Start position on genome 7546
End posion on genome 7618
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctccaaaaac
tRNA gene sequence 
AGGCTGGTAGTCCAGCGGTTACGACACCTCATTGACATGGAGGAGAGCGGCAGTTCAAAT
CTGTCTCAGCCTAtgt
Downstream region at tRNA end position 
gagcgcaaaa
Secondary structure (Cloverleaf model)
>WENV170005094	Val	GAC
                   c      Atgt gagcgcaaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T          T A
                    T     C T G T C     A
      C G A        A      | + | | |     A
    G       C C T G       G G C A G     C
    G         | | |                 T T
    T       C G A C
      T A          A     AGAGC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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