The detailed information of tRNA gene sequence


Sequence ID>WENV170005102
Genome IDAKVG01000034
Search identical group
Phylum/Class[AKVG] hypersaline lake metagenome; aqueous lake water sample, post-0.1 um filtrate containing the viral fraction
Species
Start position on genome 15288
End posion on genome 15212
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acattttata
tRNA gene sequence 
GTAGGAGTGGCAGAAACGGTTTTATGCACCAGCCTGCAAAGCTGGCGATGCCGGTTCAAG
TCCGGCCTCCTACTCAA
Downstream region at tRNA end position 
acacattttt
Secondary structure (Cloverleaf model)
>WENV170005102	Cys	GCA
                   a      TCAA acacattttt
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
    C A A A        G      | | | | |     A
  G         G A C G       G C C G G     C
  G           | | |                 T T
  T         A T G C
    T T T          A     CGAT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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