The detailed information of tRNA gene sequence


Sequence ID>ENV08001863
Genome IDABOG01045591
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 101
End posion on genome 26
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnta
tRNA gene sequence 
GCTGGCGTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCGAAT
CCGTCCGCCAGCTCCA
Downstream region at tRNA end position 
atcccctcaa
Secondary structure (Cloverleaf model)
>ENV08001863	Thr	TGT
                   a      TCCA atcccctcaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | +   | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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