The detailed information of tRNA gene sequence


Sequence ID>WENV170005222
Genome IDAMCI01000507
Search identical group
Phylum/Class[AMCI] gut metagenome; fecal sample from gut
Species
Start position on genome 2577
End posion on genome 2488
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caggtctaaa
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACGGGTAACCGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCAA
Downstream region at tRNA end position 
ccaaatgcac
Secondary structure (Cloverleaf model)
>WENV170005222	Ser	GCT
                   a      GCAA ccaaatgcac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTAACCGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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