The detailed information of tRNA gene sequence


Sequence ID>WENV170005260
Genome IDAMCI01001139
Search identical group
Phylum/Class[AMCI] gut metagenome; fecal sample from gut
Species
Start position on genome 1430
End posion on genome 1340
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagaccaaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACACCAAAAGTGT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCAA
Downstream region at tRNA end position 
attgaatatg
Secondary structure (Cloverleaf model)
>WENV170005260	Ser	GGA
                   a      GCAA attgaatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G C T C       C G G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACACCAAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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