The detailed information of tRNA gene sequence


Sequence ID>ENV08001864
Genome IDABOG01047684
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 18
End posion on genome 102
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtccggtga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGGCAGATTCGAAATCTGCTGTCCTCACGGACTC
GTGAGTTCAAATCTCACCCTCGGCCgnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001864	Ser	CGA
                   a      Cgnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       G T G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCTCACGGACTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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