The detailed information of tRNA gene sequence


Sequence ID>ENV08001865
Genome IDABOG01050853
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 99
End posion on genome 28
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnncac
tRNA gene sequence 
GGTGGCGTGGCCGAGAGGCGAGGCAGCGGCCTGCAAAGCCGTCTACACGGGTTCGAATCC
CGTCGCCACCTCgt
Downstream region at tRNA end position 
aagaggtgac
Secondary structure (Cloverleaf model)
>ENV08001865	Cys	GCA
                   c      TCgt aagaggtgac
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        G      | | | | |     G
      A     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        C G        A     CTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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