The detailed information of tRNA gene sequence


Sequence ID>WENV170005398
Genome IDAMCI01003797
Search identical group
Phylum/Class[AMCI] gut metagenome; fecal sample from gut
Species
Start position on genome 6803
End posion on genome 6715
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atataaacta
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACTCCTAAAGGGT
ATCACGAGTTCGAATCTCGTTCTCTCCGCat
Downstream region at tRNA end position 
catatagttt
Secondary structure (Cloverleaf model)
>WENV170005398	Ser	GGA
                   a      GCat catatagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACTCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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