The detailed information of tRNA gene sequence


Sequence ID>ENV08001866
Genome IDABOG01052173
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 87
End posion on genome 13
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgctgtgag
tRNA gene sequence 
GGGCCTTTAGCTTAGTCTGGTCAAAGCGCCCGGCTCATAACCGGGTGATCGATGGTTCGA
ATCCGTCAAGGCCCAtct
Downstream region at tRNA end position 
ggtggctgtn
Secondary structure (Cloverleaf model)
>ENV08001866	Met	CAT
                   g      Atct ggtggctgtn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C T G C C     A
    C T G A        A      | | + | |     G
  T         T T C G       G A T G G     C
  G         | | | |                 T T
  G         A A G C
    T C A          G     TGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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