The detailed information of tRNA gene sequence


Sequence ID>WENV170005506
Genome IDAMCI01006138
Search identical group
Phylum/Class[AMCI] gut metagenome; fecal sample from gut
Species
Start position on genome 2264
End posion on genome 2354
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccacgaaaaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACCCCTAAAGGGT
ATCACGAGTTCGAATCTCGTTCTCTCCGCAA
Downstream region at tRNA end position 
ctgccagtgt
Secondary structure (Cloverleaf model)
>WENV170005506	Ser	GGA
                   a      GCAA ctgccagtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACCCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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