The detailed information of tRNA gene sequence


Sequence ID>WENV170005655
Genome IDAMFO01000059
Search identical group
Phylum/Class[AMFO] microbial mat metagenome; iron biomat sample collected via suction sampling at the Lo'ihi Seamount, Hawai'i, in about
Species
Start position on genome 22748
End posion on genome 22837
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catagctctc
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCTAGTGCGCGCGCCTGGAGAGCGCGTAGGGCGAAAGCCC
TCGAGGGTTCGAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
gatacgccgg
Secondary structure (Cloverleaf model)
>WENV170005655	Ser	GGA
                   c      GCCT gatacgccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TAGGGCGAAAGCCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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