The detailed information of tRNA gene sequence


Sequence ID>WENV170005662
Genome IDAMFO01000066
Search identical group
Phylum/Class[AMFO] microbial mat metagenome; iron biomat sample collected via suction sampling at the Lo'ihi Seamount, Hawai'i, in about
Species
Start position on genome 28430
End posion on genome 28519
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acctacaagc
tRNA gene sequence 
GGAGGGGTGCCCGAGCGGTCGAAGGGGTGCGATTCGAAATCGCATAGGGAGCGAAAACTC
CCTCGTGGGTTCAAATCCCACCCCCTCCGCtt
Downstream region at tRNA end position 
ctttcgcttt
Secondary structure (Cloverleaf model)
>WENV170005662	Ser	CGA
                   c      GCtt ctttcgcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TAGGGAGCGAAAACTCCCTC
                    T - A
                    G - C
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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