The detailed information of tRNA gene sequence


Sequence ID>WENV170005704
Genome IDAMFO01000448
Search identical group
Phylum/Class[AMFO] microbial mat metagenome; iron biomat sample collected via suction sampling at the Lo'ihi Seamount, Hawai'i, in about
Species
Start position on genome 13463
End posion on genome 13388
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tggaagcaaa
tRNA gene sequence 
AGGCCAGTAGCTTAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gttgcacacc
Secondary structure (Cloverleaf model)
>WENV170005704	Trp	CCA
                   a      GCCA gttgcacacc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       T T C G       G G G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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