The detailed information of tRNA gene sequence


Sequence ID>ENV08001869
Genome IDABOG01055356
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 29
End posion on genome 101
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tacataccat
tRNA gene sequence 
GCTCATGTAGCTCAGTTGGTAGAGCACGTCCTTGGTAAGGACGAGGTCACCGGTTCAAAT
CCGGTCATGAGCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001869	Thr	GGT
                   t      Tnnn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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