The detailed information of tRNA gene sequence


Sequence ID>WENV170005800
Genome IDAMFO01002711
Search identical group
Phylum/Class[AMFO] microbial mat metagenome; iron biomat sample collected via suction sampling at the Lo'ihi Seamount, Hawai'i, in about
Species
Start position on genome 13064
End posion on genome 13139
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccggccac
tRNA gene sequence 
AGGGGTTTAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGTGGGTTCGAGT
CCCTCAACCCCTGCCA
Downstream region at tRNA end position 
gtgcgttccc
Secondary structure (Cloverleaf model)
>WENV170005800	Trp	CCA
                   c      GCCA gtgcgttccc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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