The detailed information of tRNA gene sequence


Sequence ID>ENV08001870
Genome IDABOG01056377
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 94
End posion on genome 18
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnccacggt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGTCGTGAGTTCGAA
TCTCGCCACTCCGACCA
Downstream region at tRNA end position 
atgaaacaag
Secondary structure (Cloverleaf model)
>ENV08001870	Pro	CGG
                   t      ACCA atgaaacaag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     G
    C       C T C G       G T G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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