The detailed information of tRNA gene sequence


Sequence ID>ENV08001871
Genome IDABOG01058680
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 86
End posion on genome 16
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tgtggtgccg
tRNA gene sequence 
GCGCCGGTAGTCTAGCGGTAGGACCTGAGCCTTCCAAGCTCATGACCCGGGTTCGAATCC
CGGCCGGCGCAtcc
Downstream region at tRNA end position 
gctcgtcggt
Secondary structure (Cloverleaf model)
>ENV08001871	Gly	TCC
                   g      Atcc gctcgtcggt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     G
      C     T C T G       C C G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        C     TGAC
                    T - A
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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