The detailed information of tRNA gene sequence


Sequence ID>WENV170006141
Genome IDAMWB02002032
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 23811
End posion on genome 23908
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttcaaaaat
tRNA gene sequence 
GGAAGTGCACAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttatttca
Secondary structure (Cloverleaf model)
>WENV170006141	SeC(p)	TCA
                   t      GCCA ttttatttca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    A     T A C C C     A
      C A C        C      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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