The detailed information of tRNA gene sequence


Sequence ID>WENV170006509
Genome IDAMWB02028535
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 284
End posion on genome 375
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaagaaaac
tRNA gene sequence 
GGAAAGGTGGCCGAGATGGCTTAAGGCGGCACCCTGCTAAGGTGTTGAAGACTAACAATC
TTCCGTGGGTTCGAATCCCACCCTTTCCGCCA
Downstream region at tRNA end position 
tatttttaaa
Secondary structure (Cloverleaf model)
>WENV170006509	Ser	GCT
                   c      GCCA tatttttaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T A G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGAAGACTAACAATCTTCC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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