The detailed information of tRNA gene sequence


Sequence ID>ENV08001877
Genome IDABOG01066532
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 85
End posion on genome 11
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gatgacagtg
tRNA gene sequence 
TCCGGGTTGGGGTAGTGGTCATCCTTCAGCCTTGTGGAGGCTGAGACGCGGGTTCAATTC
TCGCACCCGGACCTA
Downstream region at tRNA end position 
ccgtgtaccg
Secondary structure (Cloverleaf model)
>ENV08001877	His	GTG
                   g      CCTA ccgtgtaccg
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T C     A
      T G A        G      | | | + |     A
    G       T G G G       G C G G G     C
    G         | | +                 T T
    T       T C C T
      C A          T     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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