The detailed information of tRNA gene sequence


Sequence ID>ENV08001880
Genome IDABOG01086922
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 80
End posion on genome 4
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccctgcgcat
tRNA gene sequence 
GGCTACGTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCGGTGGTTCGAA
TCCACCCGTAGCCACCA
Downstream region at tRNA end position 
tatnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001880	Met	CAT
                   t      ACCA tatnnnnnnn
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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