The detailed information of tRNA gene sequence


Sequence ID>WENV170006904
Genome IDAMWB02064231
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 2800
End posion on genome 2897
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtgatcaggc
tRNA gene sequence 
GGGAATGAATGGGTCCTGGTGGGCCCCGGGGACTTCAAATCCTTCTGTCGGGCGCGTTTA
CCGTCCGAGGTGGGTTCGATTCCCACACATTCCCGCCA
Downstream region at tRNA end position 
ccttcccgcg
Secondary structure (Cloverleaf model)
>WENV170006904	SeC(p)	TCA
                   c      GCCA ccttcccgcg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     A   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G G          C     CTGTCGGGCGCGTTTACCGTCCGAG
                    G + T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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