The detailed information of tRNA gene sequence


Sequence ID>WENV170007723
Genome IDAMWB02152989
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 823
End posion on genome 912
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagatatttt
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGTTGAATGGGGCGGTCTCGAAAACCGTTGTGGGCGCAAGCCTA
CCGAAGGTTCGAATCCTTCACTCTCCGCCA
Downstream region at tRNA end position 
tcttttttct
Secondary structure (Cloverleaf model)
>WENV170007723	Ser	CGA
                   t      GCCA tcttttttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A A G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGGGCGCAAGCCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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