The detailed information of tRNA gene sequence


Sequence ID>WENV170007783
Genome IDAMWB02157658
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 49538
End posion on genome 49441
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attcgcggat
tRNA gene sequence 
GGAAGTGGAAAGGGCGCTGGTGGCTCTCCCGGACTTCAAATCCGGTGCACCGGGTTAACA
GCCTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
attcctcatc
Secondary structure (Cloverleaf model)
>WENV170007783	SeC(p)	TCA
                   t      GCCA attcctcatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C G C        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | + | |                 T T
    G       C T C T
      T G G        C     TGCACCGGGTTAACAGCCTGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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