The detailed information of tRNA gene sequence


Sequence ID>WENV170007999
Genome IDAMZC01000037
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 3329
End posion on genome 3418
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttatttcttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGACCCGGGTAACCGG
GTCCGGGGGTTCGAATCCCCCCCTCTCCGCtc
Downstream region at tRNA end position 
tatctaacgc
Secondary structure (Cloverleaf model)
>WENV170007999	Ser	CGA
                   t      GCtc tatctaacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACCCGGGTAACCGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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