The detailed information of tRNA gene sequence


Sequence ID>WENV170008005
Genome IDAMZC01000112
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 33014
End posion on genome 33088
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position
ttatatgttt
tRNA gene sequence
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTCTCACGGCGGTAACAGGGGTTCGAATC
CCCTAGGGGTCACCA
Downstream region at tRNA end position
tattttaagt
Secondary structure (Cloverleaf model)
>WENV170008005	Glu	CTC
                   t      ACCA tattttaagt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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