The detailed information of tRNA gene sequence


Sequence ID>WENV170008020
Genome IDAMZC01000272
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 7394
End posion on genome 7301
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaattat
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCGCACGACTGGAAATCGTGTGTACCCACAAAACG
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aatgtcaagg
Secondary structure (Cloverleaf model)
>WENV170008020	Ser	GGA
                   t      GCCA aatgtcaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TGTACCCACAAAACGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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