The detailed information of tRNA gene sequence


Sequence ID>WENV170008029
Genome IDAMZC01000395
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 3059
End posion on genome 2968
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgtcaacct
tRNA gene sequence 
GGAGGGGTGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTGTGGTGCGTATGCGC
CACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gcttcttctg
Secondary structure (Cloverleaf model)
>WENV170008029	Ser	CGA
                   t      GCCA gcttcttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGTGCGTATGCGCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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