The detailed information of tRNA gene sequence


Sequence ID>WENV170008031
Genome IDAMZC01000447
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 7114
End posion on genome 7190
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaataaatat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCCAGAGCATACGGTTCATACCCGTAGTGTCGTTGGTTCAAA
TCCGACCGCCGCTACCA
Downstream region at tRNA end position 
tcatatggcc
Secondary structure (Cloverleaf model)
>WENV170008031	Met	CAT
                   t      ACCA tcatatggcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A G C C     A
      T G A        A      | | + | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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