The detailed information of tRNA gene sequence


Sequence ID>WENV170008032
Genome IDAMZC01000455
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 103
End posion on genome 193
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacaagaaat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTAGGTGTGAGCCT
ACCGTGAGTTCGAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
atatttgtga
Secondary structure (Cloverleaf model)
>WENV170008032	Ser	TGA
                   t      GCCA atatttgtga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
    T T G A        G      | | | | |     G
  G         G C T G       G T G A G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTAGGTGTGAGCCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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