The detailed information of tRNA gene sequence


Sequence ID>WENV170008033
Genome IDAMZC01000455
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 233
End posion on genome 324
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttcaagttt
tRNA gene sequence 
GGAGAAGTACCCAAGTAGGTCGAAGGGGACGGTTTGCTAAACCGTTAGGTCGGGTAACCG
GCGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
caaaatacta
Secondary structure (Cloverleaf model)
>WENV170008033	Ser	GCT
                   t      GCCA caaaatacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    A T G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  G           | | |                 T T
  T         A G G G
    C G A          G     TAGGTCGGGTAACCGGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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