The detailed information of tRNA gene sequence


Sequence ID>WENV170008034
Genome IDAMZC01000485
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 7151
End posion on genome 7239
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggggcgcact
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCGATCGGGGCGGTCTCGAAAACCGTTGTGGTCCTTTGGGCC
ACCGTGGGTTCGAATCCCACCCTCTCCGCag
Downstream region at tRNA end position 
ctacaacttt
Secondary structure (Cloverleaf model)
>WENV170008034	Ser	CGA
                   t      GCag ctacaacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        G     TGTGGTCCTTTGGGCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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