The detailed information of tRNA gene sequence


Sequence ID>WENV170008040
Genome IDAMZC01000532
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 54296
End posion on genome 54224
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
gtctcgtcag
tRNA gene sequence 
GCGGGTGTAGGTCAGCGGTAGACCGTTTGCTTCCCAAGCAAAATGTCGTGGGTTCGAGTC
CCATCACCCGCTCtt
Downstream region at tRNA end position 
cagaaagaaa
Secondary structure (Cloverleaf model)
>WENV170008040	Gly	CCC
                   g      TCtt cagaaagaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
        G A        A      + | | | |     G
      C     C T G G       G T G G G     C
      G     | | | |                 T T
      G     G A C C
        T A        G     ATGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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