The detailed information of tRNA gene sequence


Sequence ID>WENV170008044
Genome IDAMZC01000558
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 8725
End posion on genome 8650
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcaaaacaa
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGCTGGGAGTTCGAGT
CTCTCCACCCGTGCAA
Downstream region at tRNA end position 
acttgcaaaa
Secondary structure (Cloverleaf model)
>WENV170008044	Trp	CCA
                   a      GCAA acttgcaaaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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