The detailed information of tRNA gene sequence


Sequence ID>WENV170008053
Genome IDAMZC01000672
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1088
End posion on genome 1164
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gagaaggcgt
tRNA gene sequence 
GGGGAAGTAGCTCAGCAGGATAGAGCGTCCGCCTCCTAAGCGGAAGGTCGGCAGTTCGAA
TCTGCCCTTCCCTACCA
Downstream region at tRNA end position 
tccatcctcc
Secondary structure (Cloverleaf model)
>WENV170008053	Arg	CCT
                   t      ACCA tccatcctcc
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C G T C     A
      C G A        A      | | | | |     G
    A       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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