The detailed information of tRNA gene sequence


Sequence ID>WENV170008074
Genome IDAMZC01001093
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1353
End posion on genome 1263
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaggcaaccc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGTGGTCTTGAAAACCACTGAGGCGTTATACGTC
TCCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
gaattgccta
Secondary structure (Cloverleaf model)
>WENV170008074	Ser	TGA
                   c      GCCA gaattgccta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAGGCGTTATACGTCTCC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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