The detailed information of tRNA gene sequence


Sequence ID>WENV170008075
Genome IDAMZC01001093
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1244
End posion on genome 1150
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacacctcgt
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTCGATTGGGGCCGCCTGCTAAGCGGTTAACCGGTCTTTAAAA
CCGGTTCGCAGGTTCGAATCCTGTCCTCCCCGCCA
Downstream region at tRNA end position 
actgaaagcg
Secondary structure (Cloverleaf model)
>WENV170008075	Ser	GCT
                   t      GCCA actgaaagcg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G A C C       G C A G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TAACCGGTCTTTAAAACCGGTTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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