The detailed information of tRNA gene sequence


Sequence ID>WENV170008076
Genome IDAMZC01001180
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 678
End posion on genome 589
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggagagcgcc
tRNA gene sequence 
GGAAGGGTGGCCGAGCGGTTGATGGCAGCGGTCTTGAAAACCGCCAACGGTGAGAGCCGT
TCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
cgccgctgac
Secondary structure (Cloverleaf model)
>WENV170008076	Ser	TGA
                   c      GCCA cgccgctgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        A     CAACGGTGAGAGCCGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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