The detailed information of tRNA gene sequence


Sequence ID>WENV170008083
Genome IDAMZC01001308
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 65
End posion on genome 157
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataccctttc
tRNA gene sequence 
GGAGAGGTAGCATAGTCTGGCCTAATGCGCGCGCCTGGAGAGCGCGTGGGCGGTAATTCC
GCCCCGTGGGTTCAAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
tgccttcaac
Secondary structure (Cloverleaf model)
>WENV170008083	Ser	GGA
                   c      GCCT tgccttcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     A
  T         T A C G       G T G G G     C
  G         | | | |                 T T
  G         A T G C
    C C T A        G     TGGGCGGTAATTCCGCCCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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