The detailed information of tRNA gene sequence


Sequence ID>WENV170008084
Genome IDAMZC01001333
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1181
End posion on genome 1257
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cacgcacggt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGCACCTGCCTTGGGCGCAGGGGGTCGCAGGTTCAAA
TCCTGCCGCCCCGACCA
Downstream region at tRNA end position 
aatcgtggtt
Secondary structure (Cloverleaf model)
>WENV170008084	Pro	TGG
                   t      ACCA aatcgtggtt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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