The detailed information of tRNA gene sequence


Sequence ID>WENV170008086
Genome IDAMZC01001373
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 4840
End posion on genome 4756
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaaacaaat
tRNA gene sequence 
GCCCAGGTAGTCTAGTGGTAAGGCGACGGTCTCGAAAACCGTTTCTCCCTCGGGAGAGCG
CAGGTTCGAATCTTGCCCTGGGCGCtt
Downstream region at tRNA end position 
attttctaaa
Secondary structure (Cloverleaf model)
>WENV170008086	Ser	CGA
                   t      GCtt attttctaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G T T C     A
        G A        A      | | | + |     G
      T     T C T G       G C A G G     C
      G     | | + |                 T T
      G     A G G C
        T A        G     TTCTCCCTCGGGAGAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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