The detailed information of tRNA gene sequence


Sequence ID>WENV170008104
Genome IDAMZC01001768
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 4659
End posion on genome 4585
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgcaaatac
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCACGAGTTCAAC
TCTCGTCCCCGCTACtt
Downstream region at tRNA end position 
caaggcaagg
Secondary structure (Cloverleaf model)
>WENV170008104	Met	CAT
                   c      ACtt caaggcaagg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     T G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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