The detailed information of tRNA gene sequence


Sequence ID>WENV170008109
Genome IDAMZC01001876
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 2629
End posion on genome 2704
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gaccccagtg
tRNA gene sequence 
GCCGGGGTAGGGTAGAGGTCCATCCTGTGGCCCTGTGGAGGCTACGACCCGAGTTCGATT
CTCGGTCCCGGCCCTA
Downstream region at tRNA end position 
attatttttc
Secondary structure (Cloverleaf model)
>WENV170008109	His	GTG
                   g      CCTA attatttttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G G C T C     A
      A G A        A      | | | | |     G
    G       T G G G       C C G A G     C
    G         | | +                 T T
    T       T C C T
      C C A        G     CGAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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