The detailed information of tRNA gene sequence


Sequence ID>WENV170008124
Genome IDAMZC01002478
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 13376
End posion on genome 13282
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaaagcggc
tRNA gene sequence 
GGGAGCGCATGGGTGCTGGTGTGCCTCGCGGTCTTCAAAACCGTTGTGGCCCCGAAAAGG
GGCCGGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
agcggacgct
Secondary structure (Cloverleaf model)
>WENV170008124	SeC(p)	TCA
                   c      GCCA agcggacgct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G T          C     TGTGGCCCCGAAAAGGGGCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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