The detailed information of tRNA gene sequence


Sequence ID>WENV170008129
Genome IDAMZC01002560
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1556
End posion on genome 1469
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgatctacac
tRNA gene sequence 
GGAGGACTGGCCGAGCGGTCGAAGGCGGGTGACTTGAAATCACTTGTGCCGAAAGGCACC
GGGGGTTCGAATCCCTCGTCCTCCGCCA
Downstream region at tRNA end position 
ttttattgtc
Secondary structure (Cloverleaf model)
>WENV170008129	Ser	TGA
                   c      GCCA ttttattgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGCCGAAAGGCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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