The detailed information of tRNA gene sequence


Sequence ID>WENV170008147
Genome IDAMZC01003030
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 5084
End posion on genome 5008
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaacgaac
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCAAA
TCCTGTCCCCGCACCCA
Downstream region at tRNA end position 
gtttgagagg
Secondary structure (Cloverleaf model)
>WENV170008147	Met	CAT
                   c      CCCA gtttgagagg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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