The detailed information of tRNA gene sequence


Sequence ID>WENV170008161
Genome IDAMZC01003335
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 3498
End posion on genome 3422
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tctctcgcga
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGTTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCAAA
TCCCGTCATCCGCGCCA
Downstream region at tRNA end position 
aaaatgccgc
Secondary structure (Cloverleaf model)
>WENV170008161	Asp	GTC
                   a      GCCA aaaatgccgc
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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